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Electron Microscope
DR.P.NITHIYA
ASSISTANT PROFESSOR
DEPARTMENT OF BOTANY
SEETHALAKSHMI RAMASWAMI COLLEGE
TIRUCHIRAPPALLI - 620002
Electron Microscope
 Microscopes that are use electrons as the light source and electromagnetic
coils to direct the path of the e- are called as electron microscopes.
 (The optical system is completely replaced by electromagnetic coils).
 The first electron microscope was designed by Knoll and Ruska (1931).
 (Wavelength of e- = 0.05A very short wavelength with very high
magnification).
 The magnification of electron microscope is 1000 times higher than the
light microscope. (Therefore the magnification of e- is 100 × 1000 = 1,
00,000 X.)
Types of Electron Microscope
 Transmission electron microscope ( TEM )
 Scanning electron microscope ( SEM)
Transmission electron microscope
(TEM):
 In this type e- are allowed to transmit through the
specimen is called TEM.
 The first TEM was designed by Max Knoll and Ernst
Ruska (1931).
Max Knoll and Ernst Ruska
Principle
 The basic principle of electron microscope is similar to the compound
microscopes but the e- beam is substituted for light source and
electromagnetic coils to optical lens.
 When high voltage current is passed through the cathode ray tube,
e- beams are produced.
 Electromagnetic coils direct the e- beams to pass through the
specimen.
 It is stained with gold or osmium and the image is collected by
objective lens and amplifier (electromagnetic coils).
 The image cannot be seen by our naked eye, so it is casted on a
screen or photographic plate or camera.
Electron microscopes are kept in
vacuum because
 1. Electrons are easily absorbed in air.
2. Electrons are move in a straight line
only in vacuum.
Instrumentation: The TEM has an
electron gun and condenser lens.
A) Electron gun
B) Condenser lens
C) Objective lens
D) Amplifier lens
E) Projector lens
F) Ancillary equipment
A) Electron gun:
 Made up of cathode ray tube with tungsten filament
(2mm long)
 Located at the top of the microscope.
 It generates e-
B) Condenser lens
 Two condenser lens or electromagnetic coils are present below the e-
gun.
 They collect and direct the beams into the specimens on a stage.
 A thin section of specimen is placed on a thin plastic film mounted on
a copper gird (3 mm diameter).
C) Objective lens
 It is an electromagnetic coil placed below the
specimen stage.
 It collects the specimen image and focus towards
the amplifier lens.
D) Amplifier lens
 It is an electromagnetic coil below the objective
lens and magnifies the image several times.
E)Projector lens
 collects the magnified image and focused on a
fluorescent screen or photographic plate.
F)Ancillary equipment
 1. The entire set up is placed in a vacuum
tube.
 2. TEM release large amount of heat during
working hours, so cooling system is present
 3. It needs high power supply
Preparation of specimen for TEM:
 Biological material contains low atomic weight elements like carbon,
hydrogen, oxygen and nitrogen.
 They do not give high resolution.
 Therefore, the biological sample has to be loaded with heavy atoms like
gold or osmium and these atoms protect the specimen from destruction.
It involves the following steps.
 The specimens are dehydrated by keep it in
ethanol or acetone.
 Place it chemical fixative like Osmium tetra
oxide. (These fixatives form covalent bonds
with biological molecules).
 After fixation, the specimen is embedded in
araldite or plastic medium.
It involves the following steps
 The embedded specimen is cut in to thin sections
of 50-100nm thickness using a glass or diamond
knife in an ultra microtome.
 The thin sections are mounted on the copper
grid.
 The grid with specimen is mounted on the
specimen stage.
 The image is viewed on fluorescence screen.
TEM image
Applications
 TEM is an ideal tool for the study of ultra
structure of a cell.
 It is used to identify plant and animal virus.
 It is widely applied in various researches in
oncology, pollution, biochemistry, molecular
biology, etc.
Disadvantages:
 Very high cost.
 We cannot study 3 dimensional structures of the
specimens.
 The specimens should be fixed properly and
should take ultra thin sections, because an
electron has limited penetrating power.
 We could not study live specimens.
 It is successful only under high vacuum
condition.
Scanning Electron
Microscope
DR.P.NITHIYA
ASSISTANT PROFESSOR
DEPARTMENT OF BOTANY
SEETHALAKSHMI RAMASWAMI COLLEGE
TIRUCHIRAPPALLI - 620002
Scanning Electron Microscope
In SEM, the surface of the specimen is
scan by electron beam.
This was first designed by Max Knoll
(1935).
Principle:
 SEM use electron beam for illumination and electromagnetic coils for
directing the path of e- beam.
 When e- is focused on the specimen, it produces secondary e- (SE), back
scattered e- (BSE) and characteristic X-rays.
 Secondary electrons are reflected due to the interactions between atoms
in specimens and e- beam.
 Back scattered e- gives information about the distribution of different
elements.
 Characteristic X-rays are emitted by the sample when the e- beam removes
e- from the inner shells of the atoms of the specimens.
 These three rays are detected by specialized detectors.
 Electronic amplifier like collectors, Scintillator and Photomultiplier
(PMT) are used to measure the e- signals.
 The e- signals are converted in to image which is focused on the monitor.
Instrumentation:
Electron gun:
it is the source of e- beam and located
at the top of the microscope.
It consists of cathode plate and anode
plate.
Condenser lens:
 there are two condenser lenses just below the
e- gun.
 They collect and concentrate the e- in to a
strong beam.
C.Deflection coils:
below the condensers, there is a
deflection coil to direct the beam of e- in
to the specimen stage.
D. Specimen stage:
it is present in slanting position at the
lower side of deflection coil.
E.Separate e- detectors
 ( scintillator& PMT ) are attached in the
vacuum tube.
 Electronic amplifiers are connected with
detectors.
 The electric signals are converted into bright
spots of varying density by scanning circuit.
Additional things
 G. Image is displayed on a photographic plate
or computer monitor.
 H. The entire set up should be placed in a
vacuum tube.
 I. Power supply with high voltage.
 J. SEM releases huge amount of heat, so
cooling system is present around it.
Preparations of specimens for SEM:
 Dry materials like wood, bone, feathers,
insect’s wings and shells are coated with thin
film of electro conductive materials like
 gold, platinum, tungsten, osmium, chromium
and graphite.
 Then the specimens are placed on the stage.
Preparation of wet specimens involves
the following steps.
 Specimens are fixed by fixatives like osmium tetroxide, potassium
permanganate, formalin,etc. which stabilize molecular organization of
specimens.
 They are dehydrated by keeping in the increasing concentrations of ethanol
or acetone.
 The specimens are coated with ultra thin layer of electro conductive alloy.
 Then they are put in the specimen stage.
 The e- beam is passing through the specimen and final image is produced
on the computer screen.
SEM IMAGES
Advantages:
 SEM is use full to view the surface of
microorganisms (Bacteria, Diatoms), pollen grains,
hairs and scales of plants and animals.
 It is free of chromatic aberrations.
 It produce 3D image.
 SEM is used study archeological specimens and
fossils.
 It is used to analyze the compound eyes of
insects.
Disadvantages:
 Lower resolution than TEM.
 High cost.
 Complete vacuum is needed.
 Factors limit the quality is
uncontrolled emission of e- and scan
faults.
Thank you

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Electron microscope

  • 1. Electron Microscope DR.P.NITHIYA ASSISTANT PROFESSOR DEPARTMENT OF BOTANY SEETHALAKSHMI RAMASWAMI COLLEGE TIRUCHIRAPPALLI - 620002
  • 2. Electron Microscope  Microscopes that are use electrons as the light source and electromagnetic coils to direct the path of the e- are called as electron microscopes.  (The optical system is completely replaced by electromagnetic coils).  The first electron microscope was designed by Knoll and Ruska (1931).  (Wavelength of e- = 0.05A very short wavelength with very high magnification).  The magnification of electron microscope is 1000 times higher than the light microscope. (Therefore the magnification of e- is 100 × 1000 = 1, 00,000 X.)
  • 3. Types of Electron Microscope  Transmission electron microscope ( TEM )  Scanning electron microscope ( SEM)
  • 4. Transmission electron microscope (TEM):  In this type e- are allowed to transmit through the specimen is called TEM.  The first TEM was designed by Max Knoll and Ernst Ruska (1931).
  • 5. Max Knoll and Ernst Ruska
  • 6. Principle  The basic principle of electron microscope is similar to the compound microscopes but the e- beam is substituted for light source and electromagnetic coils to optical lens.  When high voltage current is passed through the cathode ray tube, e- beams are produced.  Electromagnetic coils direct the e- beams to pass through the specimen.  It is stained with gold or osmium and the image is collected by objective lens and amplifier (electromagnetic coils).  The image cannot be seen by our naked eye, so it is casted on a screen or photographic plate or camera.
  • 7. Electron microscopes are kept in vacuum because  1. Electrons are easily absorbed in air. 2. Electrons are move in a straight line only in vacuum.
  • 8. Instrumentation: The TEM has an electron gun and condenser lens. A) Electron gun B) Condenser lens C) Objective lens D) Amplifier lens E) Projector lens F) Ancillary equipment
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  • 10. A) Electron gun:  Made up of cathode ray tube with tungsten filament (2mm long)  Located at the top of the microscope.  It generates e-
  • 11. B) Condenser lens  Two condenser lens or electromagnetic coils are present below the e- gun.  They collect and direct the beams into the specimens on a stage.  A thin section of specimen is placed on a thin plastic film mounted on a copper gird (3 mm diameter).
  • 12. C) Objective lens  It is an electromagnetic coil placed below the specimen stage.  It collects the specimen image and focus towards the amplifier lens.
  • 13. D) Amplifier lens  It is an electromagnetic coil below the objective lens and magnifies the image several times.
  • 14. E)Projector lens  collects the magnified image and focused on a fluorescent screen or photographic plate.
  • 15. F)Ancillary equipment  1. The entire set up is placed in a vacuum tube.  2. TEM release large amount of heat during working hours, so cooling system is present  3. It needs high power supply
  • 16. Preparation of specimen for TEM:  Biological material contains low atomic weight elements like carbon, hydrogen, oxygen and nitrogen.  They do not give high resolution.  Therefore, the biological sample has to be loaded with heavy atoms like gold or osmium and these atoms protect the specimen from destruction.
  • 17. It involves the following steps.  The specimens are dehydrated by keep it in ethanol or acetone.  Place it chemical fixative like Osmium tetra oxide. (These fixatives form covalent bonds with biological molecules).  After fixation, the specimen is embedded in araldite or plastic medium.
  • 18. It involves the following steps  The embedded specimen is cut in to thin sections of 50-100nm thickness using a glass or diamond knife in an ultra microtome.  The thin sections are mounted on the copper grid.  The grid with specimen is mounted on the specimen stage.  The image is viewed on fluorescence screen.
  • 20. Applications  TEM is an ideal tool for the study of ultra structure of a cell.  It is used to identify plant and animal virus.  It is widely applied in various researches in oncology, pollution, biochemistry, molecular biology, etc.
  • 21. Disadvantages:  Very high cost.  We cannot study 3 dimensional structures of the specimens.  The specimens should be fixed properly and should take ultra thin sections, because an electron has limited penetrating power.  We could not study live specimens.  It is successful only under high vacuum condition.
  • 22. Scanning Electron Microscope DR.P.NITHIYA ASSISTANT PROFESSOR DEPARTMENT OF BOTANY SEETHALAKSHMI RAMASWAMI COLLEGE TIRUCHIRAPPALLI - 620002
  • 23. Scanning Electron Microscope In SEM, the surface of the specimen is scan by electron beam. This was first designed by Max Knoll (1935).
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  • 25. Principle:  SEM use electron beam for illumination and electromagnetic coils for directing the path of e- beam.  When e- is focused on the specimen, it produces secondary e- (SE), back scattered e- (BSE) and characteristic X-rays.  Secondary electrons are reflected due to the interactions between atoms in specimens and e- beam.  Back scattered e- gives information about the distribution of different elements.
  • 26.  Characteristic X-rays are emitted by the sample when the e- beam removes e- from the inner shells of the atoms of the specimens.  These three rays are detected by specialized detectors.  Electronic amplifier like collectors, Scintillator and Photomultiplier (PMT) are used to measure the e- signals.  The e- signals are converted in to image which is focused on the monitor.
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  • 29. Instrumentation: Electron gun: it is the source of e- beam and located at the top of the microscope. It consists of cathode plate and anode plate.
  • 30. Condenser lens:  there are two condenser lenses just below the e- gun.  They collect and concentrate the e- in to a strong beam.
  • 31. C.Deflection coils: below the condensers, there is a deflection coil to direct the beam of e- in to the specimen stage.
  • 32. D. Specimen stage: it is present in slanting position at the lower side of deflection coil.
  • 33. E.Separate e- detectors  ( scintillator& PMT ) are attached in the vacuum tube.  Electronic amplifiers are connected with detectors.  The electric signals are converted into bright spots of varying density by scanning circuit.
  • 34. Additional things  G. Image is displayed on a photographic plate or computer monitor.  H. The entire set up should be placed in a vacuum tube.  I. Power supply with high voltage.  J. SEM releases huge amount of heat, so cooling system is present around it.
  • 35. Preparations of specimens for SEM:  Dry materials like wood, bone, feathers, insect’s wings and shells are coated with thin film of electro conductive materials like  gold, platinum, tungsten, osmium, chromium and graphite.  Then the specimens are placed on the stage.
  • 36. Preparation of wet specimens involves the following steps.  Specimens are fixed by fixatives like osmium tetroxide, potassium permanganate, formalin,etc. which stabilize molecular organization of specimens.  They are dehydrated by keeping in the increasing concentrations of ethanol or acetone.  The specimens are coated with ultra thin layer of electro conductive alloy.  Then they are put in the specimen stage.  The e- beam is passing through the specimen and final image is produced on the computer screen.
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  • 39. Advantages:  SEM is use full to view the surface of microorganisms (Bacteria, Diatoms), pollen grains, hairs and scales of plants and animals.  It is free of chromatic aberrations.  It produce 3D image.  SEM is used study archeological specimens and fossils.  It is used to analyze the compound eyes of insects.
  • 40. Disadvantages:  Lower resolution than TEM.  High cost.  Complete vacuum is needed.  Factors limit the quality is uncontrolled emission of e- and scan faults.